Sunday, 18th May AUS-oMicS 2025

• Development of bacterial carbohydrate specific monoclonal antibodies for multi-pathogen glycoproteomics and MS approaches for dissecting isobaric glycoforms - Nichollas E. Scott
• Development of an Ultra-High Spatial Resolution Mass Spectrometry Imaging System Employing Plasma Post-Ionisation - Shane R Ellis
• Biotransformation of canola feedstock waste using Brassica pest microbiome: Proof of concept for Insects as bioengineers - Avinash Karpe

• Light-mediated discovery of surfaceome nanoscale organization - Bernd Wollscheid

Poster Sessions will be held during all catering breaks and must be displayed from this time in Auditorium A&D and the foyer. Please search for your poster number and allocated board and ensure your poster is on display. Access to put up your poster is between 4:00pm - 5:00pm, Sunday 18 May. 

• Establishing deep-visual proteomics for the analysis of tumour tissue - Krisha Chokshi
• Scanning Pancreatic Cancer for T cell targets: Accurate quantification of the Immunopeptidome using ZT Scan DIA - Mohammadreza Dorvash
• Exploring proteomic markers in local and systemic fluids to advance understanding of noise-induced trauma - Motahare Khorrami
• Uncovering the mechanism of action of a novel antimalarial through targeted and untargeted LC-MS based strategies - Jennifer Le
• Prognostic proteomic biomarkers of aggressive early-stage rectal cancer identified from FFPE blocks - Vo Van Anh Pham
• The proteomes of cellular aggregates in ovarian cancer ascites correlate with their ex vivo platinum chemotherapy responses - Jack Scanlan
• Developing a Method for IgG Analysis from Human Serum using Mass Spectrometry. - Shannon W Schutt
• Structural Glycosylation Study of Neuraminidase in Tamiflu-resistant 2009 H1N1 Pandemic Strain - Joy Seitanidou
• The impact of dietary antioxidants on cysteine redox modifications in Diabetic Cardiomyopathy. - Molly Talbot
• Genetic Polymorphisms and Pain Perception in Cystic Fibrosis: an in-silico analysis - Anastasia L Ward
• The characterisation of Anti-Microbial Resistance through examination of the Interactomic profile of Staphylococcus aureus SH1000. - Aiden Brennan
• Novel mass spectrometric immunoassays for improved biomarker detection - Shaun T Ellis
• Mass Spectrometry Insights into DNA Triplex Formation and Antigene Interactions - Sarveenah R G Chandrasegaran
• Investigating The Molecular Interactions of Novel Proteins Driving Treatment Induced Neuroendocrine Prostate Cancer. - Hadeel Doehler
• Discovery of ligands against Mycobacterium tuberculosis Leucyl-tRNA synthetase (LeuRS) via Mass-Spectrometry-based screening - Tin Mak
• Characterization of an FFPE Amyloidosis TMA By Multiplexed and MALDI Imaging Based Spatial Proteomics - Larissa Meyer
• Multi-Platform Proteomic Analysis for Early Plasma Leakage Biomarker Discovery in Dengue Infection - Samaneh Moallemi
• Global Analysis of Protein Disorder in Myalgic Encephalomyelitis/Chronic Fatigue Syndrome (ME/CFS) - Han Sun
• Salivary signatures: mapping the dynamic human proteome in Strep A pharyngitis - Anuk Indraratna
• Comparing Serum Depletion Methodologies for Optimising Detection of Low Abundant Proteins - Dominique Marando
• Characterization of the immunopeptidome from tumor, PBMC and plasma in glioma patients. - Erwin Tanuwidjaya
• Molecular investigation of reproductive processes in the sea cucumber, Holothuria leucospilota - Paul A Wright
• Transforming Raw Data into Actionable Insights: A Total Ion Current-Based Assessment to Evaluate Sample Quality and Instrument Performance - Vimalnath Nambiar
• Purification and identification of saponins produced by Crown-of-Thorns Starfish (Acanthaster sp.)   - Stuart J Smith
• Oxidative release of O-acetylated glycans and their characterisation using porous graphitised carbon separation and negative mode tandem mass spectrometry - Punita Aggarwal
• Electron-Activated Dissociation with Collision-Induced Dissociation Glycopeptide Fragmentation for Improved Glycoproteomics - Kyle L Macauslane
• Revealing the distinct spatial N-glycome through cancer progression with MALDI-MSI - Ahmed Sid-Ahmed
• Multi-glycomics analysis of Tammar wallaby milk reveals dynamic changes in glycoconjugates over lactation - Isabella G Steen
• Elucidation of Glycosaminoglycan Structures by Matrix-Assisted Laser Desorption Ionization Mass spectrometry - Lijia Zhu
• A novel method for deep proteome profiling and uncovering post translational modifications in mouse lung tissue - Luke Farrell
• Efficient High-throughput Proteomics for Phenotypic Profiling: Target Deconvolution with PROTACs and Orbitrap Astral Mass Spectrometer - Chuhui Huang
• AI-driven insights into protein phosphorylation networks in Saccharomyces cerevisiae - Heather McDonald-Haynes
• Combining laser microdissection with LC-MS/MS spatial proteomics using mouse FFPE tissue - Yuen Tung Ngai
• 2D-SEC-MS/MS for the comprehensive characterisation of the ribosome - Andrew J Spiteri
• Identification and quantification of methionine oxidation in monoclonal antibody using middle-down proteomics with electron activated dissociation - Abdulafeez Akinloye
• Identification and Characterisation of Taxonomically Informative Peptides by High Resolution Mass Spectrometry for Source Identification of Trace Hair Samples. - Romy Keane
• High-Resolution Glycan Imaging and Glycoproteomic Analysis of Sarcoma Tissues - Habeebah Owolabi
• Towards rapid isotype-specific IgG glycosylation screening - Ran Ran
• ScavenPred: A Random Forest Antioxidant Peptide Predictor Built on Amino Acid Descriptors - Ken KUA Agbo
• Exploring the influence of various extraction buffers on proteomic profiling in beech mushroom - Tanvir Ahmed
• Bioactive Peptides from Family Cucurbitaceae - Himani Gamage
• Proteomics analysis supports acetyl-CoA carboxylase (ACC) as a key regulator of oat (Avena sativa) oil content - Darren Lau
• Proteomic Analysis of Brain, Liver, and Intestine from Barramundi Fed on Two Different Diets - Mohadeseh Montazeri Shatouri
• Mass spectrometry-based proteomic profiling of soluble protein fractions in commercial oat milk - Aparna Saha
• Secretome and proteomic investigation of reproductive land snail trail mucus and egg capsules.  - Inali Lutschini
• Title: In-depth characterization of a unique Australian seaweed-derived polysaccharide and protein extract - Runsheng Guo
• Plastic ingestion induces proteomic signatures of multi-organ failure and neurodegeneration in wild seabirds - Alix M de Jersey
• Functional omics insights into per- and polyfluoroalkyl substances (PFAS) exposure across marine turtle taxa - Sarah L Green

Poster Sessions will be held during all catering breaks and must be displayed from this time in Auditorium A&D and the foyer. Please search for your poster number and allocated board and ensure your poster is on display. Access to put up your poster is between 4:00pm - 5:00pm, Sunday 18 May. 

• FUNCTIONAL PHOSPHOPROTEOMIC ANALYSIS OF INSULIN SIGNALLING IN AGEING BONE - Mriga Dutt
• Widespread incorporation of azetidine-2-carboxylic acid (A2C) into the proteome and its implications for protein homeostasis and autoimmunity - Joel R Steele
• The Monash Proteomics & Metabolomics Platform: An Integrated Multi-Omics Resource for Advanced Biomarker Discovery     - Joel R Steele
• Simultaneous quantitation and discovery (SQUAD) metabolomics workflow on the Orbitrap IQ-X for the analysis of fecal bile acids - Denise P Tran
• Stable isotope tracer metabolomics reveals that Complex II assembly drives the metabolic adaptation to oxidative phosphorylation dysfunction - Sheik Nadeem Elahee Doomun
• Understanding α-synuclein conformation dynamics upon treatment with targeting peptides preventing amyloid formation - Blagojce Jovcevski
• Cerebrospinal fluid metabolomics in autistic regression reveals dysregulation of sphingolipids and decreased β-hydroxybutyrate - Jinni Yan
• Identification of proteomic biomarkers in Childhood dementia disorders - Arlene D'Silva
• MR1 presents vitamin B6–related compounds for recognition by MR1-reactive T cells - Mitchell P McInerney
• Monash Drug Target Identification Platform: Utilizing omics-based methods to identify and validate molecular targets for new drug candidates - Joshua P Morrow
• Mass Spectrometry-Based Proteomics for Rare Disease Diagnosis - Tanavi Sharma
• PEAKS Studio 12.5-Driven Proteomic Profiling Redefines Venom Composition Estimates in Malaysian Elapids (Ophiophagus hannah, Naja sumatrana, and Naja kaouthia) - Syafiq Asnawi SA Zainal Abidin
• Understanding cell-type specific selection pressure mechanism for Enterovirus A71: The key to the development of relevant infection models and novel antiviral compounds - Gael Martin
• Glycome biosignature of peripheral blood mononuclear cells in patients with symptomatic coronary artery disease - Naomi Wattchow
• Tissue- and Variety-Specific Proteomic and Metabolomic Insights into Mango (Mangifera indica L.) - Mahya Bahmani
• Automated High-Throughput Immunopeptidomics for Clinical and Preclinical Peptide Discovery - Gabriel Goncalves
• Phosphomatics 2025: Advancing Kinase Prediction, Data Imputation, and Visualization for Phosphoproteomics Research - Michael G Leeming
• High-throughput UHPLC-MS/MS_MRM amino acid and acylcarnitine profiling in early infancy predicts later obesity risk. - Susanne Wudy
• Establishing the OMIX3 Platform for Parallel, High-Throughput, Mass-Spectrometry-based Clinical Multi-omics Analysis - Subash Adhikari
• Using red algal omics database AlgaeDB to identify transcription factors in novel red algal species - Lachlan J McKinnie
• Systematic Evaluation of Sample Peparation Protocols Reveals the Impact of Common Reducing Agents and Detergents on the Sensitivity and Quality of Glycomics Analyses   - Merrina Anugraham
• GAGomics approach to understanding the roles of HS biosynthesis enzymes during neuron cell development   - Yu-Chun Chien
• DIA cross platform benchmarking and method optimization - Desmond K Li
• Enhancing Single-Cell Proteomics through optimised mass spectrometric acquisition methods at Monash Proteomics & Metabolomics Platform - Dylan H Multari
• ProteomeScholaR: Enabling Reproducible Analyses of Quantitative Proteomic Datasets Through Easy-to-Follow Scripting Templates - William Klare
• Leveraging ion mobility to enhance structural characterisation of biomolecules in native mass spectrometry. - Muhammad A Zenaidee
• Improved Proteome Coverage and Reproducibility in Large Scale Analyses using Packed Emitter Columns. - Danni Smith
• Quantitative cross-linking mass spectrometry (qXL-MS) to define the bacterial interactome in response to temperature stress - Ashleigh L Dale
• Large scale proteomic analysis of faba bean reveals variety and site-specific proteome differences - Leigh Donnellan
• Peptidomic and Proteomic Characterization of In-vitro Digesta from Different Species of Microalgae   - Sara Hamzelou
• Leveraging proteomic techniques to tailor the protein composition of lupin grain - Arineh Tahmasian
• A Comparative Study of Methanol Solvent Systems for NMR and FT-ICR-MS Untargeted Metabolomics of Australian Native Fruit - Selina Fyfe
• Transcriptomic and proteomic analyses of wax moth digestive tissues for plastic degradation - Reginald Young

Poster Sessions will be held during all catering breaks and must be displayed from this time in Auditorium A&D and the foyer. Please search for your poster number and allocated board and ensure your poster is on display. Access to put up your poster is between 4:00pm - 5:00pm, Sunday 18 May. 

• Make your own cost effective, Green and Sustainable Nitrogen and Hydrogen gas for Omics research - Nicole R Pendini
• The Proteomic Analyst Suites: A collection of easy-to-use interactive web applications to analyse and visualise proteomic datasets - Ralf B Schittenhelm
• The Extra-Slippery Slope: A Study of Ski Wax Impact on PFAS Levels in Water and Soil of an Alpine Racing Ski Slope - Michael Gray
• ADDRESSING SUSTAINABILITY IN THE LABORATORY THROUGH THE EVALUATION OF ENERGY CONSUMPTION OF A PROTOTYPE BENCHTOP LC-MS PLATFORM - Michael Gray
• Quantitative differences in rumen epithelium proteins and detection of lysine acetylation in lambs fed a low or high metabolizable energy diet. - Jude J Bond
• Assessing organisms’ capacity to synthesise UV-absorbing compounds via genome mining - Nedeljka Rosic
• Exploring superoxide dismutase 1 gene polymorphism and possible links with Parkinson’s disease development - Nedeljka NR Rosic
• Large-scale protein-disease risk association analysis in the UK Biobank: Introducing an extensive and freely available research resource in Olink® Insight - Brenton Short
• ‘If the shoe fits’ – technical nuances of species-agnostic methods for biofluid proteomics - Samantha Emery-Corbin
• The Launch of the IMSIS Asia Pacific mass spectrometry imaging society - Matthew O'Rourke
• Spliceosome dysfunction drives higher disease burden in males in an experimental mouse model of SARS-CoV2 - Matthew O'Rourke
• Integrative Multi-omics Analysis of Rett Syndrome: Deciphering Disease Mechanisms and Putative Novel Biomarkers - Ignatius Pang
• Comparison of Saccharomyces strains on secondary fermentation performance during beer production - Clifford Young
• Label-free DIA-based workflow for single-cell proteomic analysis on an Orbitrap Ascend Tribrid mass spectrometer. - Joanne Ford
• Expanding TMTpro reagents to 32-plex for high-throughput quantitative proteomics on Orbitrap platforms - Srinidhi Srikanth
• What are the important qualities of mobile phase additives for LCMS applications? - Primal Grewal
• Benchmarking imputation methods, database search engines, and mass spectrometry instrumentation: applications to quantitative proteomics studies - Jumana Yousef
• LYSOSOME-ENRICHED PHOSPHOPROTEOMICS REVEALS NOVEL AMPK SUBSTRATES - Ashfaqul Hoque
• Next-generation proteomic profiling of a pan-cancer cohort for the development of screening tools for cancer - Brenton Short
• Breath-Based Diagnostics with VOCORDER: A Clinical Study Protocol - Stefan J Swift
• Determination of sgRNA and mRNA Sequence Identity by Low-Micro Flow Ion-Pair Reversed-Phase Chromatography and High-Resolution Tandem Mass Spectrometry - Jason Anspach
• Monash Proteomics & Metabolomics Platform: Robust and efficient De-novo sequencing of Antibodies. - David L Steer
• Mass Spectrometry Imaging of Vicine and Convicine in Faba Bean Varieties - Luca LN Nicolotti
• Automated Solvent-Free Metabolome Profiling Extracellular Vesicles: Enhancing Clinical and Industrial Applications - Xavier Gallart-Palau
• Extracellular Vesicle Biomarkers for Early Detection of Dementia in Aging Schizophrenia Patients - Aida Serra
• Comparing the metabolic signatures of obesity definedby waist circumference, waist-hip ratio, or BMI. - Haya Al-Sulaiti
• Exogenous fatty acids support rapid synthesis and remodelling of cardiolipin in prostate cancer cells - Lake-Ee Quek
• Quantitative Metabolic Profiling in the Clinical Laboratory  - Konstantinos Kouremenos
• Utilizing Ion Mobility to Enhance Targeted and Non-Targeted Analysis of Per- and Polyfluoroalkyl Substances (PFAS) from a Landfill Leachate Sample - Caryn Hepburn
• Proteomic analysis of urine samples to identify potential protein biomarkers for early chronic kidney disease - Yunqi Wu
• Mapping Phosphorylation of Peptide Biomarkers Corresponding With Glioblastoma Tumours Using DDA and a Novel MRT Mass Spectrometer - Kyle Howard-Smith
• Exploration of Single Cell Lipidomics with a Novel Multi-Reflecting Q-Tof Platform - Sviatoslav Eliseenko
• HIGH RESOLUTION LOW FLOW DESI IMAGING USING A COMMERCIAL DESI SOURCE -
• Employing Ballistic Gradients, Vacuum Jacketed Columns and a Novel MRT to Increase Lipidomic Throughput Whilst Maintaining Highly Confident Identifications - Tyren M Dodgen
• Selective Mapping of Lipids in the Brain Using Desorption Electrospray Ionization Coupled With Multiple Reaction Monitoring Tandem Mass Spectrometry - Monica Alves
• Spatial proteomics to study immune cells driving inclusion body myositis - Kael Schoffer
• Adaptation of Large Panels of Per- and Polyfluoronated Alkyl Substances (PFAS) for Routine Analysis of Drinking and Environmental Waters by Direct Injection Using UHPLC-MS/MS - Heather Patsiouras
• N-linked glycopeptide identification using nanoflow LC and electron activated dissociation (EAD) MS/MS fragmentation - Jason Neo
• Enhancing glycopeptide characterization using nanoflow LC separation and electron activated dissociation fragmentation - Jeremy JP Potriquet
• Ultra-sensitive quantitation and rapid method development for targeted immunopeptidomics using the Stellar Mass Spectrometer - Farid Kakall
• Label-free quantitation of proteins and peptides using ZT Scan DIA - Justin Lim
• Application of integrated omics to explore the role of the black soldier fly (Hermetia illucens) gut microbiome in waste bioprocessing - Amy M Paten
• Method validation of the novel breast cancer lipid biomarker assay, BREASTEST plus^TM, using liquid chromatography tandem mass spectrometry - Mark David
• Single cell proteomics of peripheral blood mononuclear cells using the timsTOF Ultra 2 - Adam Rainczuk
• Short chain fatty acids (SCFAs) change protein glycosylation, cell survival and metastatic potential of colorectal cancer cells - Liisa Kautto
• Prio-PASEF: Targeted bile acid analysis together with MetID workflow - Melvin Gay
• Site-specific quantification of the in vivo UFMylome reveals myosin modification in ALS - Benjamin Parker
• GlycoTyper™ - a novel liquid-biopsy platform for high-throughput, high-sensitivity targeted glycoproteomics, exemplified be differentiating Systemic Lupus Erythematosus and Lupus Nephritis   - Steve Wilson
• Automated HILIC Enrichment Coupled with Ion Mobility-Enhanced Glycopeptide Analysis for Improved and Scalable Glycoproteomic Profiling - Steve Wilson
• Mutations in the vicinity of the IRAK3 guanylate cyclase centre impact its subcellular localisation and ability to modulate inflammatory signalling - Ilona Turek
• Regulatory Mechanism of qslA-Mediated Quorum Sensing Inhibition in Pseudomonas aeruginosa-Acinetobacter baumannii Interactions and Dual-Species Biofilm Formation   - Xin Li
• Seer Proteograph facilitates deep coverage of serum proteins from Ovarian Cancer patients - Daniel W M Pincher
• Proteome signatures reveal the environmental journey of microplastics - Cassandra L Pegg
• Impact of nitrogen fertiliser on chickpea seed quality traits - Sally Stockwell
• ‘Glass-Omics’: Enhancing the Performance of Peptide Analysis with Glass-Lined Surfaces in LC-MS Workflows - Kailyn S O'Connor
• Lyophilization prior to homogenisation and extraction increases protein yield and enriches for membrane proteins in proteomic analysis of Gram-negative bacteria - Breyer Woodland
• Australasian Computational Proteomics Community: Building a Collaborative Community to Address Computational Challenges in Proteomics for Australian Life Sciences - William P Klare
• Breaking it down: The salivary proteome of the Black Soldier Fly (Hermetia illucens) - Cynthia Castro Vargas